Projects

Selected Technical Projects

gconvex

Implements Finitely Convex Models developed in Universal Representation of Generalized Convex Functions and their Gradients. The models are used to find optimal selling mechanism with single buyer and multiple goods. The results match the theoretical optimal benchmark and are quick to be found even on personal computers.

snipar

snipar (single nucleotide imputation of parents) is a Python package for inferring identity-by-descent (IBD) segments shared between siblings, imputing missing parental genotypes, and for performing family based genome-wide association and polygenic score analyses using observed and/or imputed parental genotypes.
The imputation method and the family-based GWAS and polygenic score models are described in Young et al. 2022.

poissonreg

A simple library for sparse poisson regression, based on PyTorch.